package org.tigr.microarray.mev;

import org.tigr.microarray.mev.annotation.IChipAnnotation;
import org.tigr.microarray.mev.annotation.MevChipAnnotation;

public class RNASeqChipAnnotation extends MevChipAnnotation implements IChipAnnotation {

    boolean isRPKM = false;
    boolean isFPKM = false;
    String referenceGenome = null;
    String referenceGenomeBuild = null;
    int readLength = 0;

    public RNASeqChipAnnotation() {
        super();
    }

    public boolean isRPKM() {
        return isRPKM;
    }

    public void setRPKM(boolean isRPKM) {
        this.isRPKM = isRPKM;
    }

    public boolean isFPKM() {
        return isFPKM;
    }

    public void setFPKM(boolean isFPKM) {
        this.isFPKM = isFPKM;
    }

    public String getReferenceGenome() {
        return referenceGenome;
    }

    public void setReferenceGenome(String referenceGenome) {
        this.referenceGenome = referenceGenome;
    }

    public String getReferenceGenomeBuild() {
        return referenceGenomeBuild;
    }

    public void setReferenceGenomeBuild(String referenceGenomeBuild) {
        this.referenceGenomeBuild = referenceGenomeBuild;
    }

    public int getReadLength() {
        return readLength;
    }

    public void setReadLength(int readLength) {
        this.readLength = readLength;
    }
}
